Stem-loop hpo-mir-10088

Accession

MI0032828

Description

Heligmosomoides polygyrus hpo-mir-10088 precursor miRNA

Sequence

GAAAGCUGCCAUUAUCGAUUGCacacgaggucuaAUCGAUAUUGGCAGCUUCCAUG
(.(((((((((.(((((((((.((.....)).))))))))).))))))))).)...

Structure

--- A         U         C  a 
   G AAGCUGCCA UAUCGAUUG ac c
   | ||||||||| ||||||||| || g
   C UUCGACGGU AUAGCUAau ug a
GUA C         U         c  g 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_193019: 1044-1099 [+]

Mature hpo-miR-10088-5p

• Accession: MIMAT0040739
• Description: Heligmosomoides polygyrus hpo-miR-10088-5p mature miRNA
• Sequence: 1 - GAAAGCUGCCAUUAUCGAUUGC - 22
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10088-3p

• Accession: MIMAT0040740
• Description: Heligmosomoides polygyrus hpo-miR-10088-3p mature miRNA
• Sequence: 35 - AUCGAUAUUGGCAGCUUCCAUG - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488