Stem-loop hpo-mir-10082

Accession

MI0032821

Description

Heligmosomoides polygyrus hpo-mir-10082 precursor miRNA

Sequence

auauugccagGAGGAAGCUGGGAUUACGCAGcuacaaaguagcuCGUAUUCACUUCCUCAAcgacgcgauga
.((((((...(((((((.((((..((((.((((((...)))))))))))))))))))))......)))))).

Structure

a      ---cag       C    AU    C      a 
 uauugc      GAGGAAG UGGG  UACG AGcuac  
 ||||||      ||||||| ||||  |||| |||||| a
 guagcg      CUCCUUC ACUU  AUGC ucgaug  
a      cagcAA       -    --    -      a 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_4274: 433-504 [+]

Mature hpo-miR-10082-5p

• Accession: MIMAT0040725
• Description: Heligmosomoides polygyrus hpo-miR-10082-5p mature miRNA
• Sequence: 11 - GAGGAAGCUGGGAUUACGCAG - 31
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10082-3p

• Accession: MIMAT0040726
• Description: Heligmosomoides polygyrus hpo-miR-10082-3p mature miRNA
• Sequence: 45 - CGUAUUCACUUCCUCAA - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488