Stem-loop hpo-mir-10076

Accession

MI0032813

Description

Heligmosomoides polygyrus hpo-mir-10076 precursor miRNA

Sequence

aauucgugguGAAGAUGCAGAGGAGCUUGCUCGuuuugaaguauugucaaugcuacuccgaauaggGUAAAGAUUUUCUCGAGUUUUGACucgaguagug
.(((((.(((.(((((...(((((((((((((..((((.((((..........)))).))))..)))).)))..))))))..))))).))))))))....

Structure

---a     u   G     GCA      --   -    Gu    a    uugu 
    auucg ggu AAGAU   GAGGAG  CUU GCUC  uuug agua    c
    ||||| ||| |||||   ||||||  ||| ||||  |||| ||||     
    ugagc uCA UUUUG   CUCUUU  GAA UGgg  aagc ucau    a
guga     -   G     -AG      UA   A    au    c    cgua 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_121585: 274-373 [+]

Mature hpo-miR-10076-5p

• Accession: MIMAT0040709
• Description: Heligmosomoides polygyrus hpo-miR-10076-5p mature miRNA
• Sequence: 11 - GAAGAUGCAGAGGAGCUUGCUCG - 33
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10076-3p

• Accession: MIMAT0040710
• Description: Heligmosomoides polygyrus hpo-miR-10076-3p mature miRNA
• Sequence: 67 - GUAAAGAUUUUCUCGAGUUUUGAC - 90
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488