Stem-loop hpo-mir-10071

Accession

MI0032806

Description

Heligmosomoides polygyrus hpo-mir-10071 precursor miRNA

Sequence

AUUCAUCAGCGACUAACCCGCgaguauaccgcauacccacaggUUUAAUUGUUGAUGAAUCCGGC
((((((((((((..((((.(.(.((((.....)))).).).))))...)))))))))))).....

Structure

-----            -CU    C C a    a 
     AUUCAUCAGCGA   AACC G g guau c
     ||||||||||||   |||| | | |||| c
     UAAGUAGUUGUU   UUgg c c caua g
CGGCC            AAU    a a c    c 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_106271: 105-169 [+]

Mature hpo-miR-10071-5p

• Accession: MIMAT0040695
• Description: Heligmosomoides polygyrus hpo-miR-10071-5p mature miRNA
• Sequence: 1 - AUUCAUCAGCGACUAACCCGC - 21
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10071-3p

• Accession: MIMAT0040696
• Description: Heligmosomoides polygyrus hpo-miR-10071-3p mature miRNA
• Sequence: 44 - UUUAAUUGUUGAUGAAUCCGGC - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488