Stem-loop hpo-mir-10067

Accession

MI0032800

Description

Heligmosomoides polygyrus hpo-mir-10067 precursor miRNA

Sequence

ggcucgagcaGUAUUUUUGGGGUCGGAGGAAUUgcgucggguucuuuggugugguagcugcuGUGAUUCUGCUCUGAAGAGAUGUcaguuggcca
(((.((((((...((((((((((....(((((((((.(((.(.((.......)).).))).)))))))))))))))))))..)))...)))))).

Structure

-   u   ---   GUA          CGGA         u   g u  uu 
 ggc cga   gca   UUUUUGGGGU    GGAAUUgcg cgg u cu  g
 ||| |||   |||   ||||||||||    ||||||||| ||| | ||  g
 ccg guu   UGU   AGAAGUCUCG    UCUUAGUGu guc a gg  u
a   -   gac   -AG          ----         c   g u  ug 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_30329: 4624-4718 [+]

Mature hpo-miR-10067-5p

• Accession: MIMAT0040683
• Description: Heligmosomoides polygyrus hpo-miR-10067-5p mature miRNA
• Sequence: 11 - GUAUUUUUGGGGUCGGAGGAAUU - 33
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10067-3p

• Accession: MIMAT0040684
• Description: Heligmosomoides polygyrus hpo-miR-10067-3p mature miRNA
• Sequence: 63 - GUGAUUCUGCUCUGAAGAGAUGU - 85
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488