Stem-loop hpo-mir-10065a

Accession

MI0032797

Description

Heligmosomoides polygyrus hpo-mir-10065a precursor miRNA

Sequence

ccuuuucuguUGGAGUACAUCUGAUUCCCGCACuaaugugaguUAUGGGAUCUCAUGUACUUUUAUaggugauuua
.....(((((.(((((((((..(((((((.(((....))).)....))))))..))))))))).))))).......

Structure

--ccuuu     U         CU      ---- G   u 
       ucugu GGAGUACAU  GAUUCC    C CAC a
       ||||| |||||||||  ||||||    | |||  
       ggaUA UUUCAUGUA  CUAGGG    g gug a
auuuagu     U         CU      UAUu a   u 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_250393: 86-161 [+]

Mature hpo-miR-10065a-5p

• Accession: MIMAT0040678
• Description: Heligmosomoides polygyrus hpo-miR-10065a-5p mature miRNA
• Sequence: 11 - UGGAGUACAUCUGAUUCCCGCAC - 33
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10065a-3p

• Accession: MIMAT0040679
• Description: Heligmosomoides polygyrus hpo-miR-10065a-3p mature miRNA
• Sequence: 44 - UAUGGGAUCUCAUGUACUUUUAU - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488