Stem-loop hpo-mir-40f

Accession

MI0032792

Description

Heligmosomoides polygyrus hpo-mir-40f precursor miRNA

Sequence

CACUGCAGUACCGCCGUUGAAGcguugugagucuUCACCGGGUGUAUUGUAGUGGA
(((((((((((..(((.((((((.......).))))).)))..)))))))))))..

Structure

--           CG   U     - gu 
  CACUGCAGUAC  CCG UGAAG c  u
  |||||||||||  ||| ||||| |  g
  GUGAUGUUAUG  GGC ACUuc g  u
AG           UG   C     u ag 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_184739: 261-316 [-]

Mature hpo-miR-40f-5p

• Accession: MIMAT0040668
• Description: Heligmosomoides polygyrus hpo-miR-40f-5p mature miRNA
• Sequence: 1 - CACUGCAGUACCGCCGUUGAAG - 22
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-40f-3p

• Accession: MIMAT0040669
• Description: Heligmosomoides polygyrus hpo-miR-40f-3p mature miRNA
• Sequence: 35 - UCACCGGGUGUAUUGUAGUGGA - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488