Stem-loop hpo-mir-10060

Accession

MI0032788

Description

Heligmosomoides polygyrus hpo-mir-10060 precursor miRNA

Sequence

AAGGAGCGUGUGGCGUAGUAACGcgaggcggcgUUACAAAGCACACCUCCUUUA
((((((.(((((.(...(((((((......)))))))...))))))))))))..

Structure

--      C     G GUA       ga 
  AAGGAG GUGUG C   GUAACGc  g
  |||||| ||||| |   |||||||   
  UUCCUC CACAC G   CAUUgcg  g
AU      -     - AAA       gc 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_220642: 566-619 [+]

Mature hpo-miR-10060-5p

• Accession: MIMAT0040660
• Description: Heligmosomoides polygyrus hpo-miR-10060-5p mature miRNA
• Sequence: 1 - AAGGAGCGUGUGGCGUAGUAACG - 23
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10060-3p

• Accession: MIMAT0040661
• Description: Heligmosomoides polygyrus hpo-miR-10060-3p mature miRNA
• Sequence: 34 - UUACAAAGCACACCUCCUUUA - 54
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488