Stem-loop hpo-mir-10059

Accession

MI0032786

Description

Heligmosomoides polygyrus hpo-mir-10059 precursor miRNA

Sequence

ugcauugaguGCUGACCGAGCCGCUUAGGGGcuaagauaauGUGAGCGGACCGCGGCAAUGGGcuuaggggcu
.((.((((((.(((.(((..(((((((.(...........).)))))))....)))))..).))))))..)).

Structure

u  -a      G --  A   --AG       G GGcu 
 gc  uugagu C  UG CCG    CCGCUUA G    a
 ||  |||||| |  || |||    ||||||| |    a
 cg  gauucG G  AC GGC    GGCGAGU u    g
u  gg      G UA  -   GCCA       G aaua 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_128447: 3241-3313 [-]

Mature hpo-miR-10059-5p

• Accession: MIMAT0040656
• Description: Heligmosomoides polygyrus hpo-miR-10059-5p mature miRNA
• Sequence: 11 - GCUGACCGAGCCGCUUAGGGG - 31
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10059-3p

• Accession: MIMAT0040657
• Description: Heligmosomoides polygyrus hpo-miR-10059-3p mature miRNA
• Sequence: 42 - GUGAGCGGACCGCGGCAAUGGG - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488