Stem-loop hpo-mir-10058

Accession

MI0032785

Description

Heligmosomoides polygyrus hpo-mir-10058 precursor miRNA

Sequence

ggaaccgcuuGAUGUAUGCGCGAGGUCUGGGccgccuggauugacauggcuGAGAGGGUCGUGAUUGUACUUCUucccaccuuc
((((......((.((((.(((((..(((.(((((..((......))))))).)))...)))))...)))).)))))).......

Structure

-------    ccgcuu  U    --G     -GG   G     cc  ga 
       ggaa      GA GUAU   CGCGA   UCU GGccg  ug  u
       ||||      || ||||   |||||   ||| |||||  ||   
       ccuU      CU CAUG   GUGCU   AGA ucggu  ac  u
cuuccac    ------  U    UUA     GGG   G     --  ag 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_196731: 2515-2598 [+]

Mature hpo-miR-10058-5p

• Accession: MIMAT0040654
• Description: Heligmosomoides polygyrus hpo-miR-10058-5p mature miRNA
• Sequence: 11 - GAUGUAUGCGCGAGGUCUGGG - 31
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10058-3p

• Accession: MIMAT0040655
• Description: Heligmosomoides polygyrus hpo-miR-10058-3p mature miRNA
• Sequence: 52 - GAGAGGGUCGUGAUUGUACUUCU - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488