Stem-loop hpo-mir-10055

Accession

MI0032779

Description

Heligmosomoides polygyrus hpo-mir-10055 precursor miRNA

Sequence

ACGCGUUCCGUAGCCUUCUGCacaguugacugcccggcgagcgaauucuuuuaucgauuuauuguGUGGGAGGGAGGGAGGCGUUG
((((.((((....(((((((((((((...........(((..(((....))).)))....)))))))))))))..)))).))))..

Structure

--    G    GUAG             ugacugcccgg   gc   u 
  ACGC UUCC    CCUUCUGCacagu           cga  gaa u
  |||| ||||    |||||||||||||           |||  |||  
  UGCG AGGG    GGAGGGUGuguua           gcu  uuu c
GU    G    --AG             -------uuua   -a   u 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_14975: 147-232 [+]

Mature hpo-miR-10055-5p

• Accession: MIMAT0040642
• Description: Heligmosomoides polygyrus hpo-miR-10055-5p mature miRNA
• Sequence: 1 - ACGCGUUCCGUAGCCUUCUGC - 21
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10055-3p

• Accession: MIMAT0040643
• Description: Heligmosomoides polygyrus hpo-miR-10055-3p mature miRNA
• Sequence: 66 - GUGGGAGGGAGGGAGGCGUUG - 86
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488