Stem-loop hpo-mir-10051

Accession

MI0032772

Description

Heligmosomoides polygyrus hpo-mir-10051 precursor miRNA

Sequence

acacuucgaaGAUAGGUGUCGGUACCCCAGAACgcggucaucauacuuucauccucgaUUUCUCGGGUAGUGCGCAUUCCUggggcugua
((((((((..((...(((.((.(((((.((((((.((...............)).))..)))).))))).)))))..)).))))).))).

Structure

-   -     aa  UAG   U  G     C    --  c  ucauca 
 aca cuucg  GA   GUG CG UACCC AGAA  Cg gg      u
 ||| |||||  ||   ||| || ||||| ||||  || ||      a
 ugu ggggU  CU   CGC GU AUGGG UCUU  gc cc      c
a   c     -C  -UA   -  G     C    Ua  u  uacuuu 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_193870: 409-498 [+]

Mature hpo-miR-10051-5p

• Accession: MIMAT0040628
• Description: Heligmosomoides polygyrus hpo-miR-10051-5p mature miRNA
• Sequence: 11 - GAUAGGUGUCGGUACCCCAGAAC - 33
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10051-3p

• Accession: MIMAT0040629
• Description: Heligmosomoides polygyrus hpo-miR-10051-3p mature miRNA
• Sequence: 59 - UUUCUCGGGUAGUGCGCAUUCCU - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488