Stem-loop hpo-mir-10049

Accession

MI0032770

Description

Heligmosomoides polygyrus hpo-mir-10049 precursor miRNA

Sequence

UGACUGUAGUACAUCGGAAGCUugaguagccggagUUGUCCCUGUACUACGAUCAUC
(((.(((((((((..((((((((.........))))).))).))))))))).)))..

Structure

--   C         UC   -     gag 
  UGA UGUAGUACA  GGA AGCUu   u
  ||| |||||||||  ||| |||||   a
  ACU GCAUCAUGU  CCU UUgag   g
CU   A         -C   G     gcc 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_21935: 699-755 [+]

Mature hpo-miR-10049-5p

• Accession: MIMAT0040624
• Description: Heligmosomoides polygyrus hpo-miR-10049-5p mature miRNA
• Sequence: 1 - UGACUGUAGUACAUCGGAAGCU - 22
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10049-3p

• Accession: MIMAT0040625
• Description: Heligmosomoides polygyrus hpo-miR-10049-3p mature miRNA
• Sequence: 36 - UUGUCCCUGUACUACGAUCAUC - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488