Stem-loop hpo-mir-10048

Accession

MI0032768

Description

Heligmosomoides polygyrus hpo-mir-10048 precursor miRNA

Sequence

ACAGGAUGUCUCGUGACAGGAcuuuucuaagauUCCUGUCCGUGCCACCUUGCGC
.((((.((.(.((.((((((((((....)))..))))))))).).)).))))...

Structure

--A    A  U U  U       --   u 
   CAGG UG C CG GACAGGA  cuu u
   |||| || | || |||||||  |||  
   GUUC AC G GC CUGUCCU  gaa c
CGC    C  C U  -       ua   u 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_155572: 2315-2369 [-]

Mature hpo-miR-10048-5p

• Accession: MIMAT0040620
• Description: Heligmosomoides polygyrus hpo-miR-10048-5p mature miRNA
• Sequence: 1 - ACAGGAUGUCUCGUGACAGGA - 21
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10048-3p

• Accession: MIMAT0040621
• Description: Heligmosomoides polygyrus hpo-miR-10048-3p mature miRNA
• Sequence: 34 - UCCUGUCCGUGCCACCUUGCGC - 55
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488