Stem-loop hpo-mir-10042

Accession

MI0032761

Description

Heligmosomoides polygyrus hpo-mir-10042 precursor miRNA

Sequence

GAUUCUUCUGUGGUUGCCACGUgugaauguuugacGUGUACCCAUUGGAAGUUUUCGG
((..(((((((((.(((.((((...........))))))).))).))))))...))..

Structure

--  -UU      -   U   C    guga 
  GA   CUUCUG UGG UGC ACGU    a
  ||   |||||| ||| ||| ||||    u
  CU   GAAGGU ACC AUG UGca    g
GG  UUU      U   C   -    guuu 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_5255: 1131-1188 [-]

Mature hpo-miR-10042-5p

• Accession: MIMAT0040606
• Description: Heligmosomoides polygyrus hpo-miR-10042-5p mature miRNA
• Sequence: 1 - GAUUCUUCUGUGGUUGCCACGU - 22
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10042-3p

• Accession: MIMAT0040607
• Description: Heligmosomoides polygyrus hpo-miR-10042-3p mature miRNA
• Sequence: 36 - GUGUACCCAUUGGAAGUUUUCGG - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488