Stem-loop hpo-mir-10041

Accession

MI0032760

Description

Heligmosomoides polygyrus hpo-mir-10041 precursor miRNA

Sequence

cucccacaugGUAGGUGAUUCUUGGCCGUUAUCcuuacccaccuggGUAACUCCAUGAUCUCCUUACAGuccggucugc
..((....((..(((.((((..(((..(((((((..........))))))).))).)))).)))..))....)).....

Structure

---cu  caca  GU   U    CU   CC       uuac 
     cc    ug  AGG GAUU  UGG  GUUAUCc    c
     ||    ||  ||| ||||  |||  |||||||     
     gg    AC  UCC CUAG  ACC  CAAUGgg    c
cgucu  ccuG  AU   U    -U   -U       ucca 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_136690: 2811-2889 [+]

Mature hpo-miR-10041-5p

• Accession: MIMAT0040604
• Description: Heligmosomoides polygyrus hpo-miR-10041-5p mature miRNA
• Sequence: 11 - GUAGGUGAUUCUUGGCCGUUAUC - 33
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10041-3p

• Accession: MIMAT0040605
• Description: Heligmosomoides polygyrus hpo-miR-10041-3p mature miRNA
• Sequence: 47 - GUAACUCCAUGAUCUCCUUACAG - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488