Stem-loop hpo-mir-790

Accession

MI0032735

Description

Heligmosomoides polygyrus hpo-mir-790 precursor miRNA

Sequence

CUUGGCACUCGAGAACGACUGCgcggaugacgCGGCGAUCGACGGUGCCAAUCC
.(((((((.((.((.((.((((((....).))))))).))..)))))))))...

Structure

--C       U  -A  A  A     - g 
   UUGGCAC CG  GA CG CUGCg c g
   ||||||| ||  || || ||||| |  
   AACCGUG GC  CU GC GGCgc g a
CCU       -  AG  A  -     a u 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_234579: 807-860 [+]

Mature hpo-miR-790-5p

• Accession: MIMAT0040556
• Description: Heligmosomoides polygyrus hpo-miR-790-5p mature miRNA
• Sequence: 1 - CUUGGCACUCGAGAACGACUGC - 22
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-790-3p

• Accession: MIMAT0040557
• Description: Heligmosomoides polygyrus hpo-miR-790-3p mature miRNA
• Sequence: 33 - CGGCGAUCGACGGUGCCAAUCC - 54
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488