Stem-loop hpo-mir-1175

Accession

MI0032727

Description

Heligmosomoides polygyrus hpo-mir-1175 precursor miRNA

Sequence

AAGUGGAGGCCUGGAUCGCACUgcuccugaaugccaagUGAGAUUCUCACCUCCAUUUCA
(((((((((...(((((.((((((........))..)))).)))))...)))))))))..

Structure

--         CCU     G    --  ucc 
  AAGUGGAGG   GGAUC CACU  gc   u
  |||||||||   ||||| ||||  ||    
  UUUACCUCC   CUUAG GUga  cg   g
AC         ACU     A    ac  uaa 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_3680: 6081-6140 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from hpo-mir-1175

Mature hpo-miR-1175-5p

• Accession: MIMAT0040540
• Description: Heligmosomoides polygyrus hpo-miR-1175-5p mature miRNA
• Sequence: 1 - AAGUGGAGGCCUGGAUCGCACU - 22
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-1175-3p

• Accession: MIMAT0040541
• Description: Heligmosomoides polygyrus hpo-miR-1175-3p mature miRNA
• Sequence: 39 - UGAGAUUCUCACCUCCAUUUCA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488