Stem-loop hpo-mir-61b

Accession

MI0032714

Description

Heligmosomoides polygyrus hpo-mir-61b precursor miRNA

Sequence

UGGGUAUGUGUCUUAGUCCCGGCgcagacgguuacgUGACUAGAUCCAUACUCAGCC
((((((((.((((.((((.((..((.....))..)).)))))))).))))))))...

Structure

---        U    U    C  GC  a 
   UGGGUAUG GUCU AGUC CG  gc g
   |||||||| |||| |||| ||  || a
   ACUCAUAC UAGA UCAG gc  ug c
CCG        C    -    U  au  g 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_43338: 2844-2900 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from hpo-mir-61b

Mature hpo-miR-61b-5p

• Accession: MIMAT0040514
• Description: Heligmosomoides polygyrus hpo-miR-61b-5p mature miRNA
• Sequence: 1 - UGGGUAUGUGUCUUAGUCCCGGC - 23
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-61b-3p

• Accession: MIMAT0040515
• Description: Heligmosomoides polygyrus hpo-miR-61b-3p mature miRNA
• Sequence: 37 - UGACUAGAUCCAUACUCAGCC - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488