Stem-loop hpo-mir-5895

Accession

MI0032712

Description

Heligmosomoides polygyrus hpo-mir-5895 precursor miRNA

Sequence

UACCCGUAGCAUCUGUAUGUCUcaguacauugaagAAAUGCAUUUGCUGUGGGUGAC
(((((((((((..(((((.(((((......)).))).)))))..)))))))))))..

Structure

--           UC     G   -  gu 
  UACCCGUAGCA  UGUAU UCU ca  a
  |||||||||||  ||||| ||| ||   
  GUGGGUGUCGU  ACGUA Aga gu  c
CA           UU     A   a  ua 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_12817: 619-675 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from hpo-mir-5895

Mature hpo-miR-5895-5p

• Accession: MIMAT0040510
• Description: Heligmosomoides polygyrus hpo-miR-5895-5p mature miRNA
• Sequence: 1 - UACCCGUAGCAUCUGUAUGUCU - 22
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-5895-3p

• Accession: MIMAT0040511
• Description: Heligmosomoides polygyrus hpo-miR-5895-3p mature miRNA
• Sequence: 36 - AAAUGCAUUUGCUGUGGGUGAC - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488