Stem-loop hpo-mir-5884

Accession

MI0032709

Description

Heligmosomoides polygyrus hpo-mir-5884 precursor miRNA

Sequence

UAGGGUACUGACAUUGAAUGAGUUuuguugugcagaCCAUUUAAUUUCGUACCCUGGA
((((((((.((.((((((((.((((.((...)))))))))))))).))))))))))..

Structure

--        U  C        A    u  u 
  UAGGGUAC GA AUUGAAUG GUUu gu  
  |||||||| || |||||||| |||| || g
  GUCCCAUG CU UAAUUUAC Caga cg  
AG        -  U        -    -  u 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_16909: 4595-4652 [+]

Mature hpo-miR-5884-5p

• Accession: MIMAT0040504
• Description: Heligmosomoides polygyrus hpo-miR-5884-5p mature miRNA
• Sequence: 1 - UAGGGUACUGACAUUGAAUGAGUU - 24
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-5884-3p

• Accession: MIMAT0040505
• Description: Heligmosomoides polygyrus hpo-miR-5884-3p mature miRNA
• Sequence: 37 - CCAUUUAAUUUCGUACCCUGGA - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488