Stem-loop hpo-mir-61a

Accession

MI0032707

Description

Heligmosomoides polygyrus hpo-mir-61a precursor miRNA

Sequence

ACCGGGUGACCGCCUAGUCGUGgccgacagcucaUGACUAGACUGUUACUCGGCGU
.(((((((((.(.(((((((((((.....)).))))))))).).)))))))))...

Structure

--A         C C         -  c 
   CCGGGUGAC G CUAGUCGUG gc g
   ||||||||| | ||||||||| || a
   GGCUCAUUG C GAUCAGUac cg c
UGC         U A         u  a 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_12817: 324-379 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from hpo-mir-61a

Mature hpo-miR-61a-5p

• Accession: MIMAT0040500
• Description: Heligmosomoides polygyrus hpo-miR-61a-5p mature miRNA
• Sequence: 1 - ACCGGGUGACCGCCUAGUCGUG - 22
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-61a-3p

• Accession: MIMAT0040501
• Description: Heligmosomoides polygyrus hpo-miR-61a-3p mature miRNA
• Sequence: 35 - UGACUAGACUGUUACUCGGCGU - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488