Stem-loop hpo-mir-50

Accession

MI0032706

Description

Heligmosomoides polygyrus hpo-mir-50 precursor miRNA

Sequence

UGAUAUGUCUGGUAUUCUUGGGUUucauugacaaCCAGAACUAUUAGACAUAUCGAA
((((((((((((((((((..((((........)))))))).))))))))))))))..

Structure

--              -    UG    uca 
  UGAUAUGUCUGGUA UUCU  GGUU   u
  |||||||||||||| ||||  ||||    
  GCUAUACAGAUUAU AAGA  CCaa   u
AA              C    --    cag 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_109792: 2107-2163 [+]

Mature hpo-miR-50-5p

• Accession: MIMAT0040498
• Description: Heligmosomoides polygyrus hpo-miR-50-5p mature miRNA
• Sequence: 1 - UGAUAUGUCUGGUAUUCUUGGGUU - 24
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-50-3p

• Accession: MIMAT0040499
• Description: Heligmosomoides polygyrus hpo-miR-50-3p mature miRNA
• Sequence: 35 - CCAGAACUAUUAGACAUAUCGAA - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488