Stem-loop hpo-mir-10025

Accession

MI0032705

Description

Heligmosomoides polygyrus hpo-mir-10025 precursor miRNA

Sequence

CGGGCAUCAGUCCGGGCGUUACAgauucuugucgugUAAUGCCCAGCUGAUGCAUCGG
(((((((((((..(((((((((((((....))).)))))))))).)))))))).))).

Structure

-   -        CC          -   u 
 CGG GCAUCAGU  GGGCGUUACA gau c
 ||| ||||||||  |||||||||| |||  
 GCU CGUAGUCG  CCCGUAAUgu cug u
G   A        -A          g   u 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_211742: 374-431 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from hpo-mir-10025

Mature hpo-miR-10025-5p

• Accession: MIMAT0040496
• Description: Heligmosomoides polygyrus hpo-miR-10025-5p mature miRNA
• Sequence: 1 - CGGGCAUCAGUCCGGGCGUUACA - 23
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10025-3p

• Accession: MIMAT0040497
• Description: Heligmosomoides polygyrus hpo-miR-10025-3p mature miRNA
• Sequence: 37 - UAAUGCCCAGCUGAUGCAUCGG - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488