Stem-loop hpo-mir-34

Accession

MI0032697

Description

Heligmosomoides polygyrus hpo-mir-34 precursor miRNA

Sequence

UGGCAGUGUGGUUAGCUGGUUGcagccggugacaACGGCUAUCAACACUGCCGUCC
.((((((((...(((((((((((.....)))))..))))))...))))))))....

Structure

---U        GGU      --     a 
    GGCAGUGU   UAGCUG  GUUGc g
    ||||||||   ||||||  ||||| c
    CCGUCACA   AUCGGC  cagug c
CCUG        ACU      Aa     g 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_4797: 563-618 [+]

Mature hpo-miR-34-5p

• Accession: MIMAT0040480
• Description: Heligmosomoides polygyrus hpo-miR-34-5p mature miRNA
• Sequence: 1 - UGGCAGUGUGGUUAGCUGGUUG - 22
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-34-3p

• Accession: MIMAT0040481
• Description: Heligmosomoides polygyrus hpo-miR-34-3p mature miRNA
• Sequence: 35 - ACGGCUAUCAACACUGCCGUCC - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488