Stem-loop hpo-lin-4

Accession

MI0032688

Description

Heligmosomoides polygyrus hpo-lin-4 precursor miRNA

Literature search

1 open access papers mention hpo-lin-4
(1 sentences)

Sequence

UCCCUGAGACCUCAAUUGCGAcugcuuaaagaucGCGAAUUGUGAGCUCAGGAUAC
..((((((..(.(((((((((((......)).)))).))))).)..))))))....

Structure

--UC      AC U     -    -  gc 
    CCUGAG  C CAAUU GCGA cu  u
    ||||||  | ||||| |||| ||   
    GGACUC  G GUUAA CGcu ga  u
CAUA      GA U     G    a  aa 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_9950: 4236-4291 [-]

Mature hpo-lin-4-5p

• Accession: MIMAT0040462
• Description: Heligmosomoides polygyrus hpo-lin-4-5p mature miRNA
• Sequence: 1 - UCCCUGAGACCUCAAUUGCGA - 21
• Evidence: experimental ; Illumina [1]

Mature hpo-lin-4-3p

• Accession: MIMAT0040463
• Description: Heligmosomoides polygyrus hpo-lin-4-3p mature miRNA
• Sequence: 35 - GCGAAUUGUGAGCUCAGGAUAC - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488