Stem-loop hpo-mir-233

Accession

MI0032683

Description

Heligmosomoides polygyrus hpo-mir-233 precursor miRNA

Sequence

CUGUACAUGUCGUGCUUCAAUAccacgggugauaUUGAGCAACGAAUAUGUGCGGGA
((((((((((((((((.(((((.((....)).)))))))).))).))))))))))..

Structure

--          -   -   U     c  c 
  CUGUACAUGU CGU GCU CAAUA ca g
  |||||||||| ||| ||| ||||| ||  
  GGCGUGUAUA GCA CGA GUUau gu g
AG          A   A   -     a  g 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_59422: 2834-2890 [-]

Mature hpo-miR-233-5p

• Accession: MIMAT0040452
• Description: Heligmosomoides polygyrus hpo-miR-233-5p mature miRNA
• Sequence: 1 - CUGUACAUGUCGUGCUUCAAUA - 22
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-233-3p

• Accession: MIMAT0040453
• Description: Heligmosomoides polygyrus hpo-miR-233-3p mature miRNA
• Sequence: 35 - UUGAGCAACGAAUAUGUGCGGGA - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488