Stem-loop hpo-mir-5885c

Accession

MI0032677

Description

Heligmosomoides polygyrus hpo-mir-5885c precursor miRNA

Sequence

AGGGUAUACGUGGUGUUCUGGUAagcaugucgcuuaUGAGAUCACGCGUAUAUUCGC
.(((((((((((.((.(((.((((((.....)))))).))).)))))))))))))..

Structure

-A           G  U   G      a 
  GGGUAUACGUG UG UCU GUAagc u
  ||||||||||| || ||| |||||| g
  CUUAUAUGCGC AC AGA Uauucg u
CG           -  U   G      c 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_133142: 790-846 [-]

Mature hpo-miR-5885c-5p

• Accession: MIMAT0040440
• Description: Heligmosomoides polygyrus hpo-miR-5885c-5p mature miRNA
• Sequence: 1 - AGGGUAUACGUGGUGUUCUGGUA - 23
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-5885c-3p

• Accession: MIMAT0040441
• Description: Heligmosomoides polygyrus hpo-miR-5885c-3p mature miRNA
• Sequence: 37 - UGAGAUCACGCGUAUAUUCGC - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488