Stem-loop hpo-mir-60a

Accession

MI0032675

Description

Heligmosomoides polygyrus hpo-mir-60a precursor miRNA

Literature search

1 open access papers mention hpo-mir-60a
(2 sentences)

Sequence

AGCUGGAAACUGUCAUAAAAUCcuuuaugagcgaUAUUAUGCACAUUUUCUGGUUCA
.((((((((.((((((((.((((((...))).))).))))).))).))))))))...

Structure

--A        C   -     A   -   u 
   GCUGGAAA UGU CAUAA AUC cuu  
   |||||||| ||| ||||| ||| ||| a
   UGGUCUUU ACA GUAUU Uag gag  
ACU        U   C     A   c   u 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_140682: 2025-2081 [+]

Mature hpo-miR-60a-5p

• Accession: MIMAT0040436
• Description: Heligmosomoides polygyrus hpo-miR-60a-5p mature miRNA
• Sequence: 1 - AGCUGGAAACUGUCAUAAAAUC - 22
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-60a-3p

• Accession: MIMAT0040437
• Description: Heligmosomoides polygyrus hpo-miR-60a-3p mature miRNA
• Sequence: 35 - UAUUAUGCACAUUUUCUGGUUCA - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488