Stem-loop pal-mir-142

Accession

MI0032509

Description

Pteropus alecto pal-mir-142 precursor miRNA

Sequence

2776 reads, 821.0 reads per million, 1 experiments

CCCAUAAAGUAGAAAGCACUacuaacagcacuggaggguGUAGUGUUUCCUACUUUAUGGAUg
.(((((((((((.(((((((((...(..(....)..)..))))))))).)))))))))))...

Structure

--C           A         uaa ag a 
   CCAUAAAGUAG AAGCACUac   c  c c
   ||||||||||| |||||||||   |  |  
   GGUAUUUCAUC UUUGUGAUG   g  g u
gUA           C         -ug ga g 

Annotation confidence High

Genome context

KB031150.1: 11225672-11225734 [-]

Mature pal-miR-142-5p

• Accession: MIMAT0040130
• Description: Pteropus alecto pal-miR-142-5p mature miRNA
• Sequence: 1 - CCCAUAAAGUAGAAAGCACU - 20
• Evidence: experimental ; Illumina [1]

Mature pal-miR-142-3p

• Accession: MIMAT0040131
• Description: Pteropus alecto pal-miR-142-3p mature miRNA
• Sequence: 40 - GUAGUGUUUCCUACUUUAUGGAU - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682