Stem-loop cja-mir-9979

Accession

MI0032305

Description

Callithrix jacchus cja-mir-9979 precursor miRNA

Sequence

agaaccaccaucauauuuaugcagcuUUGGUAGUUUUGCAUGUAGAaaaaaauacccacuuugcauuuucuacaugcaaaaacuaccaaaguuguguauucaugugcgguuuuucu
((((..(((..(((((.((((((((((((((((((((((((((((((((................)))))))))))).))))))))))))))))))))...))))).)))..))))

Structure

    cc   au     --u                    -            aaauacc 
agaa  acc  cauau   uaugcagcuUUGGUAGUUUU GCAUGUAGAaaa       c
||||  |||  |||||   |||||||||||||||||||| ||||||||||||        
ucuu  ugg  gugua   auguguugaaaccaucaaaa cguacaucuuuu       a
    uu   -c     cuu                    a            acguuuc 

Annotation confidence Not enough data

Genome context

chr3: 140097001-140097116 [+]

Mature cja-miR-9979

• Accession: MIMAT0039756
• Description: Callithrix jacchus cja-miR-9979 mature miRNA
• Sequence: 27 - UUGGUAGUUUUGCAUGUAGA - 46
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857