Stem-loop cja-mir-9969

Accession

MI0032291

Description

Callithrix jacchus cja-mir-9969 precursor miRNA

Sequence

gccccgcacacguggaagccuggggugggcccucuuggggUGCAGGUUUUCAGAGCUGUGUGGccaggaagauauaccaaccgcuuuggaaaccuacguccugagugguuccuggacccagguucaccccaccucccacggggu
((((((.....((((.((((((((..(((.((.(((((((((.(((((((((((((.((.(((.............))))).))))))))))))).))))))))).)).)))....))))))))....))))......))))))

Structure

      -cacac    ---a        --gu   c  u         C             U  G   ccagg 
gccccg      gugg    agccuggg    ggg cc cuuggggUG AGGUUUUCAGAGC GU UGG     a
||||||      ||||    ||||||||    ||| || ||||||||| ||||||||||||| || |||     a
uggggc      cacc    uuggaccc    ccu gg gaguccugc uccaaagguuucg ca acc     g
      acccuc    ccac        aggu   u  u         a             c  -   auaua 

Annotation confidence Not enough data

Genome context

chr15: 62445745-62445888 [-]

Mature cja-miR-9969

• Accession: MIMAT0039744
• Description: Callithrix jacchus cja-miR-9969 mature miRNA
• Sequence: 41 - UGCAGGUUUUCAGAGCUGUGUGG - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857