Stem-loop cja-mir-9968

Accession

MI0032290

Description

Callithrix jacchus cja-mir-9968 precursor miRNA

Sequence

cugcaaguucauuuucccaaaugacccaggaagugagggggcugguuauugggucauuaaUGACUCCCCCUCUUCCUGCAGguucaugguaaaacuggcag
((((.((((....((.(((...((((((((((..(((((((..(((((((((....))))))))))))))))))))))..))))..))).)))))).))))

Structure

    a    cauu  c   aau    --      gu       cu         g 
cugc aguu    uu cca   gacc  caggaa  gaggggg  gguuauugg u
|||| ||||    || |||   ||||  ||||||  |||||||  |||||||||  
gacg ucaa    aa ggu   uugG  GUCCUU  CUCCCCC  UCAGUaauu c
    g    ----  u   -ac    AC      --       --         a 

Annotation confidence Not enough data

Genome context

chr10: 48450966-48451066 [+]

Mature cja-miR-9968

• Accession: MIMAT0039743
• Description: Callithrix jacchus cja-miR-9968 mature miRNA
• Sequence: 61 - UGACUCCCCCUCUUCCUGCAG - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857