Stem-loop cja-mir-9958

Accession

MI0032280

Description

Callithrix jacchus cja-mir-9958 precursor miRNA

Sequence

gggcuucagcauguuggccaggcuggucucaaacuccugaccucaggugaucugcccacuucagcagugcugggaggUCAGGGUACUGAGAUCACAGGCaccagccacuguucccagccc
(((((..((((.((.(((..(((((((((((...((((((((((.(((...((((........)))).)))..))))))))))...)))))))...))).)..)))))))))...)))))

Structure

     -uc    u  u   ca -   ---       aac          -a   gau    cca 
gggcu   agca gu ggc  g gcu   ggucuca   uccugaccuc  ggu   cugc   c
|||||   |||| || |||  | |||   |||||||   ||||||||||  |||   ||||    
cccga   uugu ca ccg  c CGG   CUAGAGU   GGGACUggag  ucg   gacg   u
     ccc    -  -   ac a   ACA       CAU          gg   --u    acu 

Annotation confidence Not enough data

Genome context

chr7: 4610408-4610527 [+]

Mature cja-miR-9958

• Accession: MIMAT0039733
• Description: Callithrix jacchus cja-miR-9958 mature miRNA
• Sequence: 78 - UCAGGGUACUGAGAUCACAGGC - 99
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857