Stem-loop cja-mir-9952a-2

Accession

MI0032273

Description

Callithrix jacchus cja-mir-9952a-2 precursor miRNA

Sequence

uuuuugacugccauugugaaucagaccucaguugucauggccucuagugacuagcgaccagucacuggaGUUUAUGACUAACUGAGGCCUGAuugacgaugucagugaaaag
.((((.((((.((((((.((((((.(((((((((((((((.(((((((((((.......))))))))))).))))))).)))))))).)))))).)))))).)))).)))).

Structure

u    g    c      g      a        -       c           ag 
 uuuu acug cauugu aaucag ccucaguu gucaugg cucuagugacu  c
 |||| |||| |||||| |||||| |||||||| ||||||| |||||||||||  g
 aaaa ugac guagca uuAGUC GGAGUCAA CAGUAUU Gaggucacuga  a
g    g    u      g      C        U       U           cc 

Annotation confidence Not enough data

Genome context

chr1: 187617984-187618095 [+]

Mature cja-miR-9952a

• Accession: MIMAT0039727
• Description: Callithrix jacchus cja-miR-9952a mature miRNA
• Sequence: 70 - GUUUAUGACUAACUGAGGCCUGA - 92
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857