Stem-loop cja-mir-9949

Accession

MI0032268

Description

Callithrix jacchus cja-mir-9949 precursor miRNA

Sequence

gcugcccacGGCCUUUCAGCUGUUGCUGCGCGcgugugaccagggcgacacggagaccgcgcggcggcugcuggaaccgggggcggc
(((((((.(((..(((((((.((((((((((((((((..(....)..))))).....))))))))))).)))))))))).)))))))

Structure

       a   CC       U           -----     ga c 
gcugccc cGG  UUUCAGC GUUGCUGCGCG     cgugu  c a
||||||| |||  ||||||| |||||||||||     |||||  |  
cggcggg gcc  aaggucg cggcggcgcgc     gcaca  g g
       g   --       u           cagag     gc g 

Annotation confidence Not enough data

Genome context

chr1: 141913591-141913677 [-]

Mature cja-miR-9949

• Accession: MIMAT0039723
• Description: Callithrix jacchus cja-miR-9949 mature miRNA
• Sequence: 10 - GGCCUUUCAGCUGUUGCUGCGCG - 32
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857