Stem-loop cja-mir-9939

Accession

MI0032254

Description

Callithrix jacchus cja-mir-9939 precursor miRNA

Sequence

gaucuauggcaagggcauagcuuucugugccagucugucugguggagaucugaaaguucauCAGGGCUGUGCACAGGAGGCGAugccuccaaaggc
..(((.(((...((((((.((((((((((((((((...((((((((..........))))))))))))).))))))))))).))))))))).))).

Structure

ga   a   caa      a           -     ugu        gauc 
  ucu ugg   gggcau gcuuucugugc caguc   cuggugga    u
  ||| |||   |||||| ||||||||||| |||||   ||||||||     
  gga acc   uccguA CGGAGGACACG GUCGG   GACuacuu    g
-c   a   ---      G           U     ---        gaaa 

Annotation confidence Not enough data

Genome context

chr13: 108230517-108230612 [+]

Mature cja-miR-9939

• Accession: MIMAT0039709
• Description: Callithrix jacchus cja-miR-9939 mature miRNA
• Sequence: 62 - CAGGGCUGUGCACAGGAGGCGA - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857