Stem-loop cja-mir-9936-2

Accession

MI0032251

Description

Callithrix jacchus cja-mir-9936-2 precursor miRNA

Sequence

ggugcuuaagccacagaaacuguaagcaagugacacucauccagggagaaguCACUUGCUUACAGUUUCUGUGGcuuagccauc
((((.(((((((((((((((((((((((((((((.(((.......)))..))))))))))))))))))))))))))))).))))

Structure

    c                             -a   au 
ggug uuaagccacagaaacuguaagcaagugac  cuc  c
|||| |||||||||||||||||||||||||||||  |||  c
cuac gauucGGUGUCUUUGACAUUCGUUCACug  gag  a
    c                             aa   gg 

Annotation confidence Not enough data

Genome context

chr12: 91338124-91338207 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-mir-9936-2

Mature cja-miR-9936

• Accession: MIMAT0039706
• Description: Callithrix jacchus cja-miR-9936 mature miRNA
• Sequence: 53 - CACUUGCUUACAGUUUCUGUGG - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857