Stem-loop cja-mir-9935

Accession

MI0032248

Description

Callithrix jacchus cja-mir-9935 precursor miRNA

Sequence

ccaccagauacuccuCAACAACUGGAUUGUGAGACACaugauuuaaaagaaauuauauguaguuggaauccaggaaggucgacaggauuggugg
(((((((....(((((.((..(((((((.(((.(((.(((((((.....))))))).)))..))).)))))))....)).))..))))))))))

Structure

       auac   --  A  --AA       G   -G   C       a 
ccaccag    ucc  uC AC    CUGGAUU UGA  ACA augauuu a
|||||||    |||  || ||    ||||||| |||  ||| ||||||| a
ggugguu    agg  ag ug    gaccuaa guu  ugu uauuaaa a
       ----   ac  c  gaag       g   ga   a       g 

Annotation confidence Not enough data

Genome context

chr2: 164962003-164962096 [+]

Mature cja-miR-9935

• Accession: MIMAT0039704
• Description: Callithrix jacchus cja-miR-9935 mature miRNA
• Sequence: 16 - CAACAACUGGAUUGUGAGACAC - 37
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857