Stem-loop cja-mir-9933

Accession

MI0032244

Description

Callithrix jacchus cja-mir-9933 precursor miRNA

Sequence

uuucugacccgacuuaguuuauguuugggagacugggguugucugcagguugguucuaagagcuuccuucaccuccucaaaaugacacagcuuccuuAUCUAUCACCCAUGACUGAUGGCUcuggaaa
((((.((.(((..((((((.(((...(((((.(((..(((((.((.(((..(((...(((......))).))).)))))..))))).))))))))............)))))))))))).)).)))).

Structure

-    u  c   ac      u   ---------uuu     a   gg     -c  c   uu   ucu   ag 
 uuuc ga ccg  uuaguu aug            gggag cug  guugu  ug agg  ggu   aag  c
 |||| || |||  |||||| |||            ||||| |||  |||||  || |||  |||   |||   
 aagg cU GGU  AGUCAG UAC            ccuuc gac  cagua  ac ucc  cca   uuc  u
a    u  C   --      -   CCACUAUCUAuu     -   -a     aa  -   -u   --c   cu 

Annotation confidence Not enough data

Genome context

chr6: 35432796-35432923 [-]

Mature cja-miR-9933

• Accession: MIMAT0039700
• Description: Callithrix jacchus cja-miR-9933 mature miRNA
• Sequence: 98 - AUCUAUCACCCAUGACUGAUGGCU - 121
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857