Stem-loop cja-mir-9928

Accession

MI0032238

Description

Callithrix jacchus cja-mir-9928 precursor miRNA

Sequence

uaaacagcuuaaaaaagccccagcauuagaaaacaugagAGCUGACGUAGUUCUAGACGUGaacacaaguucuaaauaaugguugaaauuuucugguucacgucuagaacuacgucaucucucaucuuuucuaaaguuggggcuuuuuuaaaauguuua
((((((..((((((((((((((((.((((((((.(((((((.((((((((((((((((((((((..(((((...(((....)))..)))))....)))))))))))))))))))))).))))))).)))))))).))))))))))))))))..))))))

Structure

      gc                a        c       C                      --ac     cua   a 
uaaaca  uuaaaaaagccccagc uuagaaaa augagAG UGACGUAGUUCUAGACGUGaac    aaguu   aau a
||||||  |||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||    |||||   |||  
auuugu  aauuuuuucgggguug aaucuuuu uacucuc acugcaucaagaucugcacuug    uuuaa   uug u
      aa                a        c       u                      gucu     -ag   g 

Annotation confidence Not enough data

Genome context

chr5: 32196936-32197094 [-]

Mature cja-miR-9928

• Accession: MIMAT0039694
• Description: Callithrix jacchus cja-miR-9928 mature miRNA
• Sequence: 40 - AGCUGACGUAGUUCUAGACGUG - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857