Stem-loop cja-mir-9924

Accession

MI0032231

Description

Callithrix jacchus cja-mir-9924 precursor miRNA

Sequence

cucugcuccaaguuuuccaauuccuggggugaggauuugugagaaacaguuggggucaggagaACAGUGGGAUAUGAUGAGACGCUUuuaacauuuuuauuugcuaucaggggucuccucuugucccaguuccccuguccuagcuuugcauaucacauuggguaguuugguuaacuuuccagugggg
(((.((((((.(..........).)))))))))(((.(((((.....((((((((.((((.((((..(((((((.((.(((((.(((.((.((........)).))..))).))))).)).))))))))))).))))))))))))))))).))).(((((((.((((.....)))).)))))))...

Structure

cucugcuccaaguuuuccaauuccuggggugag   u     gaaac        u    a    AG       U  U     G   -u  a  uuu 
                                 gau uguga     aguugggg cagg gaAC  UGGGAUA GA GAGAC CUU  ua ca   u
                                 ||| |||||     |||||||| |||| ||||  ||||||| || ||||| |||  || ||    
                                 cua acguu     ucgauccu gucc cuug  acccugu cu cucug gga  au gu   u
ggggugaccuuucaauugguuugauggguuaca   u     -----        -    c    --       u  c     g   cu  c  uua 

Annotation confidence Not enough data

Genome context

chr14: 29998535-29998721 [+]

Mature cja-miR-9924

• Accession: MIMAT0039687
• Description: Callithrix jacchus cja-miR-9924 mature miRNA
• Sequence: 64 - ACAGUGGGAUAUGAUGAGACGCUU - 87
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857