Stem-loop cja-mir-9923

Accession

MI0032230

Description

Callithrix jacchus cja-mir-9923 precursor miRNA

Sequence

gaauggacacagaacacaguaauuguuuacagaaaugaggauucucccugcucugucauggggaaaagaaaaugACAGCAAAGAGAAUCCUCAGUucuguaaacaaacucagucuccaauuc
(((((((.((.((.....((..((((((((((((.(((((((((((..((((..(((((............)))))))))..))))))))))).)))))))))))))))).)).))).))))

Structure

    -   c  a  acaca  aa            a           cc    cu     gggga 
gaau gga ac ga     gu  uuguuuacagaa ugaggauucuc  ugcu  gucau     a
|||| ||| || ||     ||  |||||||||||| |||||||||||  ||||  |||||      
cuua ccu ug cu     ca  aacaaaugucuU ACUCCUAAGAG  ACGA  CAgua     a
    a   c  a  -----  --            G           AA    --     aaaga 

Annotation confidence Not enough data

Genome context

chr13: 13631615-13631736 [+]

Mature cja-miR-9923

• Accession: MIMAT0039686
• Description: Callithrix jacchus cja-miR-9923 mature miRNA
• Sequence: 75 - ACAGCAAAGAGAAUCCUCAGU - 95
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857