Stem-loop cja-mir-9917-1

Accession

MI0032222

Description

Callithrix jacchus cja-mir-9917-1 precursor miRNA

Sequence

aggaaaaaaaaaguuuucuuaauagcauuuacagucuuuacagucaugugcuguaAAGACUGUAAAUGCUAUUAAGAaaaccuuuguuuuccu
(((((((.(((.((((((((((((((((((((((((((((((((.....)))))))))))))))))))))))))))))))).))).)))))))

Structure

       a   a                                c 
aggaaaa aaa guuuucuuaauagcauuuacagucuuuacagu a
||||||| ||| |||||||||||||||||||||||||||||||| u
uccuuuu uuu caaaAGAAUUAUCGUAAAUGUCAGAAaugucg g
       g   c                                u 

Annotation confidence Not enough data

Genome context

chr3: 106872463-106872555 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-mir-9917-1

Mature cja-miR-9917

• Accession: MIMAT0039680
• Description: Callithrix jacchus cja-miR-9917 mature miRNA
• Sequence: 56 - AAGACUGUAAAUGCUAUUAAGA - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857