Stem-loop cja-mir-9914

Accession

MI0032219

Description

Callithrix jacchus cja-mir-9914 precursor miRNA

Sequence

uacuuaagguccagaAACACGAUGGCAAAGACGAGAuuauuaaaaaugugguacguggaugaaaaucucccacuaucuauguuacuauguuacaaggucuuguuucagugacuguuuuuugaccuagua
((((..(((((.(((((((.(.(.((..((((((((((......(((((((((((((((((............)))))))).)))))))))....))))))))))..)).))))))))).)))))))))

Structure

    ua     c       C A G  AA          auuaaa         -        aaaau 
uacu  agguc agaAACA G U GC  AGACGAGAuu      aauguggua cguggaug     c
||||  ||||| ||||||| | | ||  ||||||||||      ||||||||| ||||||||      
auga  uccag uuuuugu c a ug  uuuguucugg      uuguaucau guaucuau     u
    --     u       - - g  ac          --aaca         u        caccc 

Annotation confidence Not enough data

Genome context

chr6: 183832-183960 [+]

Mature cja-miR-9914

• Accession: MIMAT0039677
• Description: Callithrix jacchus cja-miR-9914 mature miRNA
• Sequence: 16 - AACACGAUGGCAAAGACGAGA - 36
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857