Stem-loop cja-mir-513f-2

Accession

MI0032212

Description

Callithrix jacchus cja-mir-513f-2 precursor miRNA

Sequence

gggaugccacauccagccauccagcgugcagugcccuuacaagaaggugccauucauguggacuaaaucaUGAAUGUCGCCUUCUUGAGAAGAguaauguacagcauguacugcacaugugguguccc
((((((((((((.(((.(((...(((((((.(((.(((.((((((((((.((((((((..........)))))))).))))))))))..))).))).))))).)))))..)))...))))))))))))

Structure

            --c   -c   cca  -     g   c   -a          c        ugga 
gggaugccacau   cag  cau   gc gugca ugc cuu  caagaaggug cauucaug    c
||||||||||||   |||  |||   || ||||| ||| |||  |||||||||| ||||||||     
cccuguggugua   guc  gua   cg caugu aug GAA  GUUCUUCCGC GUAAGUac    u
            cac   au   ---  a     a   A   GA          U        uaaa 

Annotation confidence Not enough data

Genome context

chrX: 134330538-134330665 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from cja-mir-513f-2

Mature cja-miR-513f-3p

• Accession: MIMAT0039670
• Description: Callithrix jacchus cja-miR-513f-3p mature miRNA
• Sequence: 71 - UGAAUGUCGCCUUCUUGAGAAGA - 93
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857