Stem-loop cja-mir-519b

Accession

MI0032205

Description

Callithrix jacchus cja-mir-519b precursor miRNA

Sequence

cggugccggagcaagauggccucuggcugugaccucuugacggaagcacuuucuguuuucugaaagcaaagAAAGUGUCUCCGUUAAGAGGGUcacugccugagaaaagcaucacugaagcuggcgcug
(((((((((.....((((..(((.(((.((((((((((((((((.((((((((((((((...)))))..))))))))).)))))))))).)))))).))).))).....)))).......)))))))))

Structure

         --agcaa    ---gc   u   u      -          a         --     c 
cggugccgg       gaug     cuc ggc gugacc ucuugacgga gcacuuucu  guuuu  
|||||||||       ||||     ||| ||| |||||| |||||||||| |||||||||  ||||| u
gucgcgguc       cuac     gag ccg cacUGG AGAAUUGCCU UGUGAAAga  cgaaa  
         gaaguca    gaaaa   u   u      G          C         aa     g 

Annotation confidence Not enough data

Genome context

chr22: 44888936-44889064 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from cja-mir-519b

Mature cja-miR-519b

• Accession: MIMAT0039664
• Description: Callithrix jacchus cja-miR-519b mature miRNA
• Sequence: 72 - AAAGUGUCUCCGUUAAGAGGGU - 93
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857