Stem-loop cja-mir-1253

Accession

MI0032194

Description

Callithrix jacchus cja-mir-1253 precursor miRNA

Sequence

gcaagagguagaaucccaaAGAAGAGAAGAUCAGCCUGCAaagacggacugccaaaugcaggcugauguucuccucuuuggauucucuugu
((((((....((((((.(((((.(((((.(((((((((((.....((....))...))))))))))).))))).)))))))))))))))))

Structure

      ggua      c     A     G           aagac  a 
gcaaga    gaaucc aaAGA GAGAA AUCAGCCUGCA     gg c
||||||    |||||| ||||| ||||| |||||||||||     ||  
uguucu    cuuagg uuucu cucuu uagucggacgu     cc u
      ----      -     c     g           --aaa  g 

Annotation confidence Not enough data

Genome context

chr5: 60676317-60676407 [+]

Mature cja-miR-1253

• Accession: MIMAT0039656
• Description: Callithrix jacchus cja-miR-1253 mature miRNA
• Sequence: 20 - AGAAGAGAAGAUCAGCCUGCA - 40
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857