Stem-loop cja-mir-638

Accession

MI0032193

Description

Callithrix jacchus cja-mir-638 precursor miRNA

Sequence

gcgggcgcggcgGGGACCGCGGGCGGGCGGCGGCCUaggacgcggagggcugaccgggaauggcgcgcccugcgccgccggcguaauugcggcgcuugcgugcccgc
(((((((((.((((..((((((...(.(((((((.((((.((((..(..((.....))..)..)))).)))).))))))).)....))))))..)))))))))))))

Structure

         g    GA      -GCG G       C    a    ga gg  g 
gcgggcgcg cgGG  CCGCGG    G CGGCGGC Uagg cgcg  g  cu a
||||||||| ||||  ||||||    | ||||||| |||| ||||  |  || c
cgcccgugc guuc  ggcguu    c gccgccg gucc gcgc  u  gg c
         -    gc      aaug g       c    c    gg aa  g 

Annotation confidence Not enough data

Genome context

chr22: 10141968-10142074 [+]

Mature cja-miR-638

• Accession: MIMAT0039655
• Description: Callithrix jacchus cja-miR-638 mature miRNA
• Sequence: 13 - GGGACCGCGGGCGGGCGGCGGCCU - 36
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857