Stem-loop cja-mir-548g

Accession

MI0032189

Description

Callithrix jacchus cja-mir-548g precursor miRNA

Sequence

guuguuuagaaagugauacuauuauuuugguucAAAAGUAAUUGCAGUUUUUCCCauacuuuuuacggcaauaacagcaauuacuuuugcacuaaccuaauacguuuaaccaucaaacacac
..(((((.((..((...(((((((..(((((.(((((((((((((.(((.((.((...........)).)).))).))))))))))))).)))))..))))).))...))..)))))))...

Structure

-gu     a  aa  gau  -     uu     u             A   U  C  auac 
   uguuu ga  gu   ac uauua  uuggu cAAAAGUAAUUGC GUU UU CC    u
   ||||| ||  ||   || |||||  ||||| ||||||||||||| ||| || ||    u
   acaaa cu  ca   ug auaau  aauca guuuucauuaacg caa aa gg    u
cac     -  ac  auu  c     cc     c             a   u  c  cauu 

Annotation confidence Not enough data

Genome context

chr21: 5251364-5251485 [-]

Mature cja-miR-548g

• Accession: MIMAT0039652
• Description: Callithrix jacchus cja-miR-548g mature miRNA
• Sequence: 34 - AAAAGUAAUUGCAGUUUUUCCC - 55
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857